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Genome sequence of human rhinovirus A22, strain Lancaster/2015.

Atkinson, Kate V.; Bishop, Lisa A.; Rhodes, Glenn; Salez, Nicolas; McEwan, Neil R.; Hegarty, Matthew J.; Robey, Julie; Harding, Nicola; Wetherell, Simon; Lauder, Robert M.; Pickup, Roger W.; Wilkinson, Mark; Gatherer, Derek

Authors

Kate V. Atkinson

Lisa A. Bishop

Glenn Rhodes

Nicolas Salez

Neil R. McEwan

Matthew J. Hegarty

Julie Robey

Nicola Harding

Simon Wetherell

Robert M. Lauder

Roger W. Pickup

Mark Wilkinson

Derek Gatherer



Abstract

The genome of human rhinovirus A22 (HRV-A22) was assembled by deep sequencing RNA samples from nasopharyngeal swabs. The assembled genome is 8.7% divergent from the HRV-A22 reference strain over its full length, and it is only the second full-length genome sequence for HRV-A22. The new strain is designated strain HRV-A22/Lancaster/2015.

Citation

ATKINSON, K.V., BISHOP, L.A., RHODES, G., SALEZ, N., MCEWAN, N.R., HEGARTY, M.J., ROBEY, J., HARDING, N., WETHERELL, S., LAUDER, R.M., PICKUP, R.W., WILKINSON, M. and GATHERER, D. 2017. Genome sequence of human rhinovirus A22, strain Lancaster/2015. Genome announcements [online], 5(12), article number 01713-16. Available from: https://doi.org/10.1128/genomeA.01713-16

Journal Article Type Article
Acceptance Date Jan 19, 2017
Online Publication Date Mar 23, 2017
Publication Date Mar 23, 2017
Deposit Date Mar 28, 2017
Publicly Available Date Mar 28, 2017
Journal Genome announcements
Electronic ISSN 2169-8287
Publisher American Society for Microbiology
Peer Reviewed Not Peer Reviewed
Volume 5
Issue 12
Article Number 01713-16
DOI https://doi.org/10.1128/genomeA.01713-16
Keywords Genome; Rhinovirus; Deep sequencing; Strain; Lancaster
Public URL http://hdl.handle.net/10059/3033

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