Genome sequence of human rhinovirus A22, strain Lancaster/2015.

Atkinson, Kate V.; Bishop, Lisa A.; Rhodes, Glenn; Salez, Nicolas; McEwan, Neil R.; Hegarty, Matthew J.; Robey, Julie; Harding, Nicola; Wetherell, Simon; Lauder, Robert M.; Pickup, Roger W.; Wilkinson, Mark; Gatherer, Derek

Abstract

The genome of human rhinovirus A22 (HRV-A22) was assembled by deep sequencing RNA samples from nasopharyngeal swabs. The assembled genome is 8.7% divergent from the HRV-A22 reference strain over its full length, and it is only the second full-length genome sequence for HRV-A22. The new strain is designated strain HRV-A22/Lancaster/2015.

Citation

ATKINSON, K.V., BISHOP, L.A., RHODES, G., SALEZ, N., MCEWAN, N.R., HEGARTY, M.J., ROBEY, J., HARDING, N., WETHERELL, S., LAUDER, R.M., PICKUP, R.W., WILKINSON, M. and GATHERER, D. 2017. Genome sequence of human rhinovirus A22, strain Lancaster/2015. Genome announcements [online], 5(12), article number 01713-16. Available from: https://doi.org/10.1128/genomeA.01713-16

• Journal Article Type: Article
• Acceptance Date: Jan 19, 2017
• Online Publication Date: Mar 23, 2017
• Publication Date: Mar 23, 2017
• Deposit Date: Mar 28, 2017
• Publicly Available Date: Mar 28, 2017
• Journal: Genome announcements
• Electronic ISSN: 2169-8287
• Publisher: American Society for Microbiology
• Peer Reviewed: Not Peer Reviewed
• Volume: 5
• Issue: 12
• Article Number: 01713-16
• DOI: https://doi.org/10.1128/genomeA.01713-16
• Keywords: Genome; Rhinovirus; Deep sequencing; Strain; Lancaster
• Public URL: http://hdl.handle.net/10059/3033
• Contract Date: Mar 28, 2017